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Rna-seqc

Rna-seqc

Name: Rna-seqc

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RNA-SeQC Documentation. Description: Calculates metrics on aligned RNA-seq data. Author: David Deluca (Broad Institute), [email protected] 25 Apr We introduce RNA-SeQC, a program which provides key measures of data quality. These metrics include yield, alignment and duplication rates. djpooria.com RNA-SeQC. This is a temporary repository for the RNA-SeQC quality control software for RNA sequencing data.

RNA-SeQC is a java program which computes a series of quality control Recipe, djpooria.com seqc. RNA-SeQC is a program which provides key measures of data quality for RNA- seq datasets. These metrics include yield, alignment and duplication rates; GC. RNA-SeQC is a java program which computes a series of quality control metrics for RNA-seq data. The input can be one or more BAM files. The output consists.

According to the manual using '- BWArRNA ' is more robust method. If you would like to know about rRNA reads, you could: 1. Pull out the rRNA. 9 Jul "RNA-SeQC is a java program which computes a series of quality control metrics for RNA-seq data. The input can be one or more BAM files. (a) RNA-SeQC will work with one or more input samples to ' from publication ' RNA-SeQC: RNA-Seq metrics for quality control and process optimization' on. 26 Apr Hey guys, I want to use RNA-SeQC to analyse my tophat output.I know that the default output (djpooria.com) of tophat could not be as. 11 Nov We introduce RNA-SeQC, a program which provides key measures of data quality. These metrics include yield, alignment and duplication rates.

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